Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQSNTLTVQILDKEYCINCPDDERANLESAARYLDGKMREIRSS-------GKVIGADRVAVMAALNITHDLLHRKERLDQESSSTRERVRELLDRVDRALANPADAGEA
2L9Q Chain:A ((1-109))
--MSDAGRKGFGEKASEALKPDSQKSYAEQGKEYITDKADKVAGKVQPEDNKGVFQGVHDSAEKGKDNAEGQGESLADQARDYMGAAKSKLNDAVEYVSGRVHGEEDPTKK
General information:
TITO was launched using:
RESULT:
Template:
2L9Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16828 for 435 contacts (38.7/contact) +
2D Compatibility (PS) -11048 + (NN) -3570 + (LL) 180
1D Compatibility (HY) 4000 + (ID) 650
Total energy: 5740.0 ( 13.20 by residue)
QMean score : 0.237
(partial model without unconserved sides chains):
PDB file :
Tito_2L9Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L9Q-query.scw
PDB file :
Tito_Scwrl_2L9Q.pdb
: