Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGKAKLSLAWQIVIGLALGIAVGAVLNHFSAEKAWWIANVLQPAGDIFIRLIKMIVVPIVISSLVVGIAGVGDAKKLGRIGLKTIIYFEIVTTVAIVVGLLLANLFQPGTGIDMSTLGTVDISQYQKTTQEVQHDHAFIATILNLIPSNVFAAIARGEMLPIIFFSVMFGLGLSSLPNDLREP-------LVKVFQGVSETMFKVTHMIMKYAPIGVFALIAVTVANFGFASLLPLAKLVILVYVAIVFFALVVLGLIARMFGFSIMRLIRIFKDDLVLAYSTASSETVLPRIIEKMEAYGAPKAISSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIGQQIMLVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLE------GLAFIAGVDRIMDMARTALNVIGNALAVLVISKWEGMYDAAKGQRYWDSLPHLRQAVGEAKGKQATLE |
4X2S Chain:C ((15-417)) | ----------KILIGLILGAIVGLILGHYGYAHA--VHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPAR-LGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGG----QQFQP-----HQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTSSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDRGRTMVNVTGDLTGTAIVAKTEG-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X2S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -422766 for 3254 contacts (-129.9/contact) +
2D Compatibility (PS) -40398 + (NN) -13219 + (LL) 4408
1D Compatibility (HY) -43200 + (ID) 7650
Total energy: -522825.0 ( -160.67 by residue)
QMean score : 0.306
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