Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------MTTFIPIIFSSVVVVLFVIGNFANGFIALVNSIERVKRQKISFADQI-LTALAVSRVGLLWVLLLNWYSTVFNPAFYSVE--VRTTAYNVWAVTGHFSNW-LATSLSIFYLLKIANF--SNLIF---LHLKRRVKSVILVM-------------LLGPLLFLACQ---------LFVINMKEIVRTKEYEGNLTWKIKLRSAVYLSDAT----VTTLGNLVPFTLTLLCFLLLIC-------SLCKHLKKMQLHGKGSQD-----PSTKVHIKALQTVIFFL---------LLCAVYFLSIMISVWSFGSLENK------------PVFMFCKAIRFSYPSIHPFILIWGN--KKLKQTFLSVLRQVRYWVKGEKPSSP |
| 4WZI Chain:A ((85-576)) | VTPFAQVLASLRSVRNNFTIQKLAMETLEELDWALDQLETIQTYRSVSEMASNKFKRMLNRELTHLSEMSRCGNQVSEYISNTFLDKENEDHLAKELEDLNKWGLNIFNVAGYSHNRPLTAIMYAIFQERDLLKTFRISSDTFITYMMTLEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHADIFMNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHAADLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEISPMADKHTACVEKSQVGFIDYIVHPLWETWADLVQPDAQDILDTLEDNRNWYQAMIP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WZI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226691 for 1974 contacts (-114.8/contact) +
2D Compatibility (PS) -31134 + (NN) -12947 + (LL) -196
1D Compatibility (HY) -6400 + (ID) 2650
Total energy: -280018.0 ( -141.85 by residue)
QMean score : 0.247
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