Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSPADNIFIILITGEFILGILGNGYIALVNWIDWIKKKKISTVDYILTNLVIARICLISVMVVNGIVIVLNPDVYTKNKQQIVIFTFWTFANYLNMWITTCLNVFYFLKIASSSHPLFLWLKWKIDMVVHWILLGCFAISLLVSLIAAIVLSCDYRFHAIAKHKRNITEMFHVSKIPYFEPLTLFNLFAIVPFIVSLISFFLLVRSLWRHTKQIKLYATGSRDP----STEVHVRAIKTMTSFIFFFF----LYYISSILMTFSYLMTKYK-LAVEFGEIAAILYPLGHSLILIVLNNKLRQTFVRMLTCRKIACMI--- |
2A1F Chain:A ((1-239)) | LSQPIYKRILLKLSGEALQGEDGLGI-------------DPAILDRMAVEIKELVEMGVEVSVVLGG------------------------GNLFR-------------GAKLAKAGMNRVVGDHMGMLATVMNGLAMRDSLFRADVNAKLMS----------------------AFQLNGICDTYNWSEAIKMLRE---------------KRVVIFSAGTGNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCAKLYKNLSYAEVIDKELKVM--DLSAFTLARDHGMPIRVFNMGKPGALRQVVTGTEEGTTICEG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281467 for 1782 contacts (-158.0/contact) +
2D Compatibility (PS) -23439 + (NN) -10779 + (LL) 9028
1D Compatibility (HY) -5600 + (ID) 1750
Total energy: -314007.0 ( -176.21 by residue)
QMean score : 0.202
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