Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MASKDFAIGMILLSQIM----VGFLGNFFLLYHYSFLCFTRGMLQSTDLILKHLTIAN----------SLVILSKGIPQTMAAFGLKDSLSDIGCKFVFYVHRVG---RAVCVGNACLLSVF-QVITISPSEFRWAE---LKLHAHKYIRSF------------------------------ILVLCWILNTLVNITV------------LLHVTGKWNSINSTKTNDYGYCSGGSRSRI------------PHSLHIVLLSSLDVLCL------GLMTLASGSMVFILHRHKQQVQHIHGTNLSARSSPES--------RVTQSI--LVLVSTLCYFTRSPPSLHMSLFPNPSWWLLNTS---------ALITACFPMVSPFVLMSRHPRIPRLGSACCGRNPQFPKLVR---- |
| 4Q6O Chain:A ((21-437)) | MIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVL---KGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAIEGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYK---NNAFSGMILVKFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224104 for 2162 contacts (-103.7/contact) +
2D Compatibility (PS) -31804 + (NN) -3230 + (LL) 224
1D Compatibility (HY) -11200 + (ID) 3300
Total energy: -273414.0 ( -126.46 by residue)
QMean score : 0.135
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