Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MNIENIQQEFFPLFDKIKKEGDPIYNARVGFNIVK-SLIERGTGWNKDEIYEVLQKELNKMERAQQE--LEKEAERVLSR-YIIDDDVKGAVKGVSIYGNHA-SIKLED-NKKEFKISEFLNSDFCQKNG-ISGFSTLHRDEKSGMHGFVAEEGEGKDKRKVRHYVVTDGSYEMTLNWYDKEGKKCTIRININ-ANSIKLIGGNITEEQL-KDLSKANWDVKIGGLFL---HEIEFRKTRENEINMSFETAIKIFGRS--------------IQTTDMNREIGSQNAMTSTTNSHAPTKENPPLPPHRVSSLKKGVEQRKTKSLDHQSNGQKVEFNKYIQSNTLDLHELNSMNVPKLLELLKKEQNTTQINLGWNSIDNKNAEKLFRQRGLVIMANC-REEENPGDQGYNLQSLFEVPT-PSPLRTSSLKKNVSDEQGENISFK-PISQSQDNRQKDERYDNLTFVMFRYTTSGRKKTVTEEDLQVKSAVFALPTQDVTL-KKVEGTFKSEDAKKSDN--------MRDKQTSQDGVASILARRAEIEFLYSESERGDGLSDPEDDRSGNKDEYL-TLLNPQSDDKN-AKRGEKYENC---DCNDNLEHIYENTDWLCDDKQDNRQRDKRYDNHTFAMF-V-YTLPGSKRPDDLHRNEQKLDNQQQPEIQQQGQSHSRPQSDSKGNLDVKGIQPSALSEDGD-RPISTSTDKRNTKQLEYGKNSKDHNSETCMVPSKPAGKESKSIQFTNPSNQMVGKLEKVLKKLDRESEKTVQQVAEGSVSINKPLSSVSTDGNMDAEQNSHTQSEETNLSTPEKTNVNSST-SFKELEQRLSQKNYELKKISSKVRYISPQTKEYLMEAELLKDSSTDIRKAIERKNAHTSPTTDKNSELYKLLEKDK---TQLKVRVIEKVVEGASAKHTDNYDRNR---ITLGNKNRKLLWTKHVKQQQEKGKGISI |
| 2HG4 Chain:A ((9-901)) | EEKLRRYLKRTVTELDSVTARLREVEHRAGEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEPDPDARLGGMLAAAGDFDAGFFGISPREALAMDPQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGL---EGPA--------MTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQG-GLAADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENA------GVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDD-PLWIGSV----KSNIGHTQAAAGVAGVMK-----------AVLALRHGEMPRTLHF--------DEPSPQIEWAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPEADGPVPLVLSGRDEQAMRAQAGRLADHLAREPRNSLRDTGFTLATRRSAWEHRAVVVGDRDEALAGLRAVADGRIADRTATGQARTRRGVAMVFPGQGAQWQGMARDLLRESQVFADSIRDCERALAPHVDWSLTDLLSGARPLDRVDVVQPALFAVMVSLAALWRSHGVEPA--AVVGHSQGEIAAAHVAGALTLEDAAKLVAVRSRVLRRLGGQGGMASFGLGTEQAAERIGRFAGA-----------LSIASVNGPRSVVVAGES----GPLDELIAECEAEAHK-ARRIPVDYASHSPQVESLREELLTELAGISPVSADVALYSTTTGQPIDTATMDTAYWYANLREQV----RFQDATRQLAEAGFDAFVEVSPHPVLTVGIEATLDSA-----LPADAGACVVGTLRRDRGGLADFHTALGEAYAQGVEVDWSPAFADARPVELPVYPFQRQRYWLPI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 410456 for 7120 contacts (57.6/contact) +
2D Compatibility (PS) -84838 + (NN) -10592 + (LL) 3944
1D Compatibility (HY) -9200 + (ID) 5450
Total energy: 304320.0 ( 42.74 by residue)
QMean score : 0.073
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