Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEVNILDKKWY---SIVEDPKGFTLNIINASLKELKIDQYK-PNISIALADDNL--LHQ-LNLR-FRQMNKPTNVLSFPCEQLSSECDLGDIAISIDTVRKESDEYH-IPIPAHVAHMLVHGLLHLLGYDHQKKGEEVVMKNLEGKILASLGYNMCAI
2XC8 Chain:A ((1-121))
GIEIVNRKAVWYLTSEIKETETGIEVS--AGELHKGDEEVFPVEEVSFDLTPDDTYPVEYMLYLHMNVQTKKVSWSLCKAYLDGEGYCDY-----------QGNERLIMYPVSVTV-------------FPNGTREGTIFLYEKEDR------------
General information:
TITO was launched using:
RESULT:
Template:
2XC8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22536 for 685 contacts (-32.9/contact) +
2D Compatibility (PS) -11261 + (NN) 6981 + (LL) 3492
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -29924.0 ( -43.68 by residue)
QMean score : 0.157
(partial model without unconserved sides chains):
PDB file :
Tito_2XC8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XC8-query.scw
PDB file :
Tito_Scwrl_2XC8.pdb
: