Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------------------------MAYPDFTLENKLSGVIAGVDEVGRGPLAGPVMSAAVVF---TNRNIIIEGINDSKKLTAKNRQVLYEKIISVAKFGIGMASVAEINSYN-----ILQATKLSMERALVNLGIEL-----DYVLVDGNQPPKVKWQ------------VKSIVKGDSLSVSVAAASIVAKVARDQLMQELHNQYPEYNWYKNKGYGTKGH----IDAINLYGVTEHHRKSFAPILNSTKRALL- |
2D0B Chain:A ((2-309)) | SNYVIQADQQLLDALRAHYEGALSDRLPAGALFAVKRPDVVITAYRSGKVLFQGKAAEQEAAKWISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETVPHAVTVLDNPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAPAEPEAIIIDEFLKRDSYFRYLSDEDRIIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAVG-LLLPKGAGAIVDEAAARIIRARGEEMLETCAKLHFANTKKALAIAKRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64884 for 1662 contacts (-39.0/contact) +
2D Compatibility (PS) -21621 + (NN) -8210 + (LL) 104
1D Compatibility (HY) -4000 + (ID) 2300
Total energy: -100911.0 ( -60.72 by residue)
QMean score : 0.347
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