Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQYNHPKYKLELVKF-NNWPDLMDALNSGRIDGASTLIELAMKSKQKG-SNIKAVALGHHEGNVIMGQKGMHLNEFNNGDDYHFGIPHRYSTHYLL-LEELRKQLKIKPGHFSYHEMSPAEMPAALSEHRITGYSVAE-PFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKM-NDRKQSVDIMTHHFKQSRDVLTQSAAWTSYGDLT-----IKPSGYQEITTLVKQHHLFNP--PAYDDFVEPSLYKEASRS----- |
| 2X7P Chain:A ((14-319)) | ---------------------------------LPTLKVAYIPEHFSTPLFFAQQQ-GYYKAHDLSIEFVKVPEGSGRLINLLNSNEVDIAIGLTEAFIADIAKGNENIHVLDTYVKSPLLWAVSTGSNRDDVTDAKQLKRIGVSRIGSGSYVMSFVLAHQLGVPSFDQFQVLSNFKNLRDSVNLKDGVEGSDAFMWEYFTSKKYYDNHEIKQIDQIYTPWSSWVVATSSDSLQAKSDVIKNFIDAVNQGIQYYNEHVDEAIEYISSNLDYSAEDAKEWTKTVEFNSRIGKTPLDWDTIVVKTKDTLKLAGVLAESDDVILKRLNSNVKKTNLQLDGDLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X7P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -68339 for 2424 contacts (-28.2/contact) +
2D Compatibility (PS) -31236 + (NN) -11751 + (LL) 2704
1D Compatibility (HY) -8400 + (ID) 1950
Total energy: -118972.0 ( -49.08 by residue)
QMean score : 0.402
|
|
|