Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MTKRNPKLAALLSVIPGL-GQFYNKRPIKGTIFFIFFISFISVF---YSFLNIGFWGLFTLGTVPKLDDSRVLLA-QGIIS------------ILLVAFAIMLYVINILDAYRNAERFNRNEE----IKDPKARMVATWDKT-------FPYLLISPGTFLLI-----FVVVFPLIF-MFGVAFTNYNLYNAPPRHTLEWVGLDNFKTL----FTIGVWRKTFFSVITWTLVWTLVATTLQIALGL----------FLAIIVNHPVVKGKKFIRTVLI-LPWAVPSFVTILIFVALFNDEFGA----INNDILQPLLGVAPAWLSDPFWAKVALIGIQVWLG-----FPFVFALFTGVLQSISSDWYEAADMDGASSWQK-----FRNITFPHVIYATAPLLIMQYAGNFNN---------------FNLIYLFNKGGPPVS---GQNAGSTDILISWVYNLTFEFNNFNMGAVVSLIIGFIVAIVAFIQFRRTSTFKDEGGL |
| 4PW2 Chain:A ((72-585)) | RYEEIDCLINDDATIKGRREGSEVYMPFSWMEKYFEVYGKVVQYDGYDRFEFSHSYSKVYAQREQYHPNGVFMSFEGYNVEVRDRVKCISGVEGVPLSTQWGPQGYFYAIQIAQYGLSHYSKNLTERPPHVEVYDTAEERSAWTVPKGCSLTRVYDKTRATSVREFSAPENSEGVSLPLGNTKDFIISFDLKFTSNGSVSVILETTEKGPPFVIHYVTTTQLILLKDRDITYGIGPRT-----TWTTVTRDLLTDLRKGIGLSNTKAVKATKTMPRRVVKLVVHGTGTIDNITISTTSHMAAFYAASDWLVRNQDERGGWPIMVTRKLGEGFRALEPGWYSAMAQGQAMSTLVRAYLMTKDDRYLKAALRATGPFKLPSEQHGVKAVFMNKYDWYEEYPTIPSSFVLNGFIYSLIGLFDLAQTAGEKLGRDAGQLYSKGMESLKVMLPLYDTGSGTIYDLRHFILGTAPNLARWDYHTTH-INQLQLLGTIDNSPIFRDSVKRWKSYLKGGRAKHN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -374913 for 3044 contacts (-123.2/contact) +
2D Compatibility (PS) -43798 + (NN) -6074 + (LL) 568
1D Compatibility (HY) -2000 + (ID) 3750
Total energy: -429967.0 ( -141.25 by residue)
QMean score : 0.193
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