Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKILFDVDGIFLSEERCFDVSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNL |
2NO4 Chain:A ((103-234)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLD--SCLSADDL-----------KIYKPDPRIYQFACDR-------------LG-VNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNP---PEY-EFAPLKHQVNSLSELWPLLAK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53104 for 971 contacts (-54.7/contact) +
2D Compatibility (PS) -13892 + (NN) -4578 + (LL) 19628
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: -57046.0 ( -58.75 by residue)
QMean score : 0.382
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