Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKTLQQIDKLICSWLKQIDNVIPQLIME--MTTETKRHRFDLVTNVDKQIQQQFQQFLATHFPEHQLLAEEKSNEMI-------------------------TNEINHLWIMDPIDGTANLVKQQ-EDYCIILAYFYEGKPMLSYVYDYPH----------KKLYKAIRGEGAFCNGIKMEEPPSLKLEDAIISFNAQVMNLDTVQDLFD--ASFSYRLVGACGLDSMRVAKGQFGAHINT--NPKPWDIAAQFLFAELLNLKMTTLDGKAIDHL------KGAPFIISN---KACHETVLKILNANGGYQKYR |
| 1JP4 Chain:A ((5-305)) | --HNVLMRLVASAYSIAQKAGTIVRCVIAEGDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFPKLTIIGEEDLP--EVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVDGTKEYTEGLLDNVTVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLGRTIWGVLGLGAFGFQLK--EAP---AGKHIITTTRSHSN-KLVTDCIAAMNPDNVLRVGGAGNKIIQLIEGKASAYVFASPGCKKWDTCAPEVILHAVGGKLTDIHGNPLQYDKEVKHMNSAGVLAALRNYEYYASRVPESVKSA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170961 for 2161 contacts (-79.1/contact) +
2D Compatibility (PS) -26590 + (NN) -5966 + (LL) 1396
1D Compatibility (HY) -8400 + (ID) 2550
Total energy: -213071.0 ( -98.60 by residue)
QMean score : 0.541
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