Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQVELLSPAGNLKKLKIALNY-GADAVYGGVSHFSLRNRAGKEFTLETFKE-------GIDYAHALDKKVYATINGFPFNSQL-KLLEEHLYKMAELE-PDAFIIAAPGVIKLASKIAPHIPVHLSTQANVLNTLDAQVFYDLG---------------VKRIVCARELSLNDAVEIKKALPDLELEIFVHG-SMCFAFSGRCLISALQKGRVPNRGS-CANDCR-FDYEYYVKNPDNGVMMRLV-----------EEEGVGTH-IF-------------NAKDLNLSGHIAEILSSNAISALKI---EGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASEL-NT-LKNRGFTDGYLMRRPFERLDTQ-NHQTAISEGDFQVNGEITEDGRFFACKFTTTTNTAYEI-IAPKNAAITPIVNDIGKIYTFEKRSYLVLYKILLENNTELETIHSGNVNLVRLPAPLPAFSFLRTQVRV--- |
| 4OY2 Chain:A ((10-502)) | NLNIQHSQPAINLQSPFYKVAVPRYQLRHFHRENFGSHIRPGTKIVFSKLKARKRKRDKGKDVKESFSTSQDLTI-GDTAPVYLMEYSEQTPVALSKFGMANKLINYYRKANE-QDTLRPKLPVG---ETHVLGVQDKSPFWNFGFVEPGHIVPTLYNNMIRAPVFKHDISGTDFLLTKSSGFGISNRFYLRNINHLFTVGQTFPVEEIPGPNSRKVTSMKATRLKMIIYRILNHNHSKAISIDPIAKHFPDQDYGQNRQKVKEFMKYQRDGPEKGLWRLKDDEKLLDNEAVKSLITPEQISQVESMSQGLQFQEDNEAYNFDSKLKSLEENLLPWNITKNFINSTQMRAMIQIHGVGDPTGCGEGFSFLKTSMKHSYNVAQQQKAYDEEIAK--TWYTHTKSLSISNPFEEMTNPDE------INQTNK-HVKTDRDDKKILKIVRKKRDENGIIQRQTIFI-RDPRVIQGYIKIKEQDKEDVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6095 for 2327 contacts (2.6/contact) +
2D Compatibility (PS) -40251 + (NN) 12086 + (LL) 1052
1D Compatibility (HY) 17600 + (ID) 1200
Total energy: -4618.0 ( -1.98 by residue)
QMean score : -0.029
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