Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLISIAFLLVLCLLNYSSFRMLKSFLTLKKISRYAYLGFFILLSAGEATFVFYRNVMPSHLFVLTSACSFVSFIAFVFSLSFYGFSYSVEKIDFLPSRRKGLKNFLRIGFYLALLGYFWRGFYEGLARPKIKETPIYLDKL---DKELKIILLTDMHVGSLLQKDFVNYIVEEVNQKEVDMVLIGGDLVDENIE------KVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIE-----PILSFLNTLDM-----TILGNECVHL--GGINLCGVYDYFAR-KRQDFAPDIDKALKKR--DSSKPTILLAHQPKQIR----------------SLKESHSIDLVLSGHTHAGQIFPFSL-LVKLAQTYLHGLYKHSGTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA |
| 1XZW Chain:A ((114-363)) | --------------------------------------------------------------------------------------------------------------------------------------WFVTPPKPGPDVPYVFGLIGDIGQTHDSN-TTLTHYEQ--NSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVS-DESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100144 for 1581 contacts (-63.3/contact) +
2D Compatibility (PS) -22126 + (NN) -6340 + (LL) 12080
1D Compatibility (HY) -1600 + (ID) 1700
Total energy: -119830.0 ( -75.79 by residue)
QMean score : 0.344
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