Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQDFSSLLLKLQEYWKDQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRPTDGRYGENPN-RLGSYYQFQV--VIKPSP-----SNIQELYLKSLEVLGINLNEHDIRFVEDNWESPTLGAWGLGWEVWLD--GMEVTQFTY-----------------FQQVGGIPCSPIPVEITYGLERLTMYVQKVENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVERLLEMFKNAQAEALHCLENKLPLPAYDLVMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEEEREERLKNALTKA |
1G5H Chain:A ((161-307)) | ---------------------------------------------KLPFGLAQIGVCFHPVS--------TRVGEKTEASLVWFTPTRTSSQWLDFWLRHRLLWWRKFAMSPSN---FSSADCQDELGRKGS--KLYYSFPWGKEPIETLWNLGDQELLHTYPGNVSTIQGRDGRKNVVPCVLSVSGDVDLGTLAYLYDSFQLRKVLKLHPCLAPIKVALDVGKGPTVELRQVCQGLLNELLENGISVWPGYSETVHSSLEQLHSKYDEMSVLFSVLVTETTLENGLIQLRSRDTTMKEMMHISKLRDFLVKYLASASNVAAALD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33203 for 696 contacts (-47.7/contact) +
2D Compatibility (PS) -12024 + (NN) -3618 + (LL) 2772
1D Compatibility (HY) 0 + (ID) 550
Total energy: -46623.0 ( -66.99 by residue)
QMean score : 0.240
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