Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MDLQQIDELENKFEEQEE-QAQDTPLKQEPSTKEVKIPKKRGRKKSLLDEDKKKSFNIAFSPCVIKELNEFLLEFGSFKETRSTFIE-EALIRHLKHRKNTQEQKLLKQLERLQNK---------EKGIMKTMNLNEFFTHKIIYKDTPLKFKDTLEQEISQASLVEKLILANILANMVFAKISNENAPKILISRLMCKFSPID---------YESTIPSDFKPIDEE-----EYE-------DDLEWLNEEKEDRLFNYYLFL---------------NGIKESDVEEVFNE-SVEIYDECLI-----------------EIAQNVLKDKFSYDIDLLQVLVKGYAKEIREFLSYKPI-----KEIKDFKDKDTALYISLGKDYDKEKE------PFSKKLQQCFKEILESKGI---------------------------- |
| 3F8T Chain:A ((18-492)) | RIGEVASRFGLPTRVLIEIVRTESFQRSLARVTSGKPVVLDLRELDSDLASWIATHARLVEPALRELVRTVAPDVEPRVRFRGLPHRFRRVERIRPMDGALISIEGVVREVRGAERLEHAIVDTGSELVAVRLHGHRLGPGLRVEILGIVRSATLDALEVHKKDPIPEVHPDPAELEEFRELADKDPLTTFARAIAPLPGAEEVGKMLALQLFSCVGKNSERLHVLLAGYPVVCSEILHHVLDHLAPRGVYVDLRRTELTDLTAVLKEDRGWALRAGAAVLADGGILAVDHLEGAPEPHRWALMEAMDKGTVTVDGIALNARCAVLAAINPGEPSDPPIARIDLDQDFLSHFDLIAFLGVPSYTLLRRYLLYAIREHPAPELTEEARKRLEHWYETRREEVEERLGMGLPTLPVTRRQLESVERLAKAHARMRLSDDVEPEDVDIAAELVDWYLETAMQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 42203 for 2245 contacts (18.8/contact) +
2D Compatibility (PS) -34929 + (NN) 10426 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 1900
Total energy: 10600.0 ( 4.72 by residue)
QMean score : 0.099
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