Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLETYALKSGAVFISDAHFLPKSP----------HLIHTLKELLS--AKPPQVFFMGDIFHVLVGYLPLDKEQQKIIDLIHALSEISQVFYFEGNHDFSMRFVFNSKVMVFERQNQPALFQYDNKRFLLAHGDLFITKAYEFYITQLTSTWARFFLTFLNLLSFKTLYPFLKKRIYQKPVRLWELEPKELKAFIEKRLKAYQNYIKDLNIDSIDGIIEGHFHLKSGTKIHSSVPIYCPLPSFYYEQSLFKVSSSLLEPSQNKDA |
3D03 Chain:A ((1-86)) | --------MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR--P---EEYQVARQILGSL--NYPLYLIPGNHDDKALFLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQVGEQWVS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3D03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -46496 for 474 contacts (-98.1/contact) +
2D Compatibility (PS) -8129 + (NN) -6805 + (LL) 972
1D Compatibility (HY) -800 + (ID) 900
Total energy: -62158.0 ( -131.14 by residue)
QMean score : 0.529
|
|
|