Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------------------------------------MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCAK-PSKEVKTGDVISLHYLKGIEEYTILQIPTLKNVPRKDTHLYIAPKTKE---------------------------
1C06 Chain:A ((1-159))
MKLSEYGLQLQEKQKLRHMYGVNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGHILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALEANNYIP---DYLSFDPEKMEGTYTRLPERSELPAEINEALIVEFYSR
General information:
TITO was launched using:
RESULT:
Template:
1C06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45828 for 564 contacts (-81.3/contact) +
2D Compatibility (PS) -8442 + (NN) -1040 + (LL) 88
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -57772.0 ( -102.43 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_1C06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C06-query.scw
PDB file :
Tito_Scwrl_1C06.pdb
: