Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MKKTVHGWEIISSLDVRVYQ----DEAGGVAILVDRDNFGDQVPVLLN------FGDDGVDIKALSHLTK--SVRVSLDKK-------VRIEWHDEYFEERTQAMECIEVERD----------
4Q7O Chain:A ((4-136))
MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNITTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPINLAYHYFNIAISDFLIAHPEYQKKCKEIQKTY
General information:
TITO was launched using:
RESULT:
Template:
4Q7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24466 for 590 contacts (-41.5/contact) +
2D Compatibility (PS) -10014 + (NN) -3311 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -42891.0 ( -72.70 by residue)
QMean score : 0.176
(partial model without unconserved sides chains):
PDB file :
Tito_4Q7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q7O-query.scw
PDB file :
Tito_Scwrl_4Q7O.pdb
: