Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFDFMTLEKVREKGPLVHNITNIVVANDSANGLLAIGASPIMASAKEEMDELAKMADVLVINIGTLDGE-LVTAMKIAGRAANVA-GTPVVLDPVGVGATS--YRRKVVQ-ELLAEIQFAAIRGNAGELAAIAGEAWEAKGVDAGVGSADVLSIAGKVANEWSTVVIISGEV----DVISDGTRFAKVANGSALLPRITGSGCLLSAVCGSFIAVQDDAFRASVEACASYAVASEYAEMELERKLPGSFRPLFLDALASWSVEKTRAKAKIQESGEHK |
| 1UB0 Chain:A ((71-247)) | -------------------------------------------------------LHAAKT--GALGDAAIVEAVAEA---VRRFGVRPLVVDPVM-----AKEAAAALKERLF--PLADLVTPNRLEAEALLGRPIRT--------LKEAEEAAKALLALGPKAVLLKGGHLEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAKGRPLAEAVAEAKAYLTRALKTAPSL-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104859 for 1231 contacts (-85.2/contact) +
2D Compatibility (PS) -16260 + (NN) -2449 + (LL) 7716
1D Compatibility (HY) 400 + (ID) 1600
Total energy: -117052.0 ( -95.09 by residue)
QMean score : 0.460
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