Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKTIDMKYLRLLAKEYPTIAKTATEIINLEAIMNLPKGTEHFLSDVHGEYSAFEQVLRNGSGVVKRKIRDIFGAELDDAEINSLSTLIYYPEEKMDLIASETEDLHAWYRTTLFRLIELCQYVASKYTRSKVRKAMPEDFAYILEELLHENYNEDDKKLYYEEILQHIISLGRAEEFISALSLLIQQLV-----VDHLHIVGDVYDRGPYPDKIMDTLMNYHS---LDFQWGNHDILWMGAASGSRVCAANV------IRISARYLNLDILEDSYGISLRPLALFADEVYKDDPCTYFQ---PKNEENINYSNAEITQIARMHKAISIIQFKLEGEIIKRRKEFDMNHRLLL----------------QFIDYKKGTIQLKGKEYQLLDNHFPTINPENPYELTDAERELIGKITAAFKNCRRLQKHVQFLYSKGSMFLTYNGNLLYHGCIPLHKDGTFMEMKLRGEKYAGRALLEQFEILTREAYVRPTGTKEKKYACDIVWYLWTGAISSLFGKSEMTTFERYFVAEKETHTEEKNPYYKLRNNELICKQILEEFELDGECGHIINGHTPVKEGKGESPIKASGKMLVIDGGFAKAYHKETNLAGYTLLFNSYGLQLVSHQPFTTKEDAIKNETDILSTRQVIEMEINRKRVRDTDIGAKLSEQAEDLKLLLDAYRNGLLHENR |
| 1NNW Chain:A ((2-252)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRYGRVVCPGSVGFPPGKEHKATFALVDVDTLKPKFIEVEYDKKIIEERIRAEGLPEEIIKILYHGGRP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49544 for 1745 contacts (-28.4/contact) +
2D Compatibility (PS) -23039 + (NN) 325 + (LL) 32212
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -47446.0 ( -27.19 by residue)
QMean score : 0.151
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