Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSYEPNTKETMQKIKELTSIPSPTGNTGKIIEKLAKDLDASKIPYRLN--------NKGGLIVTLPGKD-ETKHRMLTAHVDTLGAMVKEIKADGRLLLTLIGGYRFNAIEGEYCTIETSAGDLYSGTILMHQTSVHVYKDAGTAERNDKNMEVRLDVKALDADKVRALGIEVGDFVSFDPRVQIINDEYIKSR-H----LDDKASVAILLQLINHIHENNLELPHTTHFLISNNEEIGYGGNSNIPAE---TVEYLAVDMGALGDGQ---------------------------------------TSD-----EYTVSICA--------------------------------------------------------KDG----SGPYHLGLRKHLVELAKKNNIDYKVDIYPFYASDASAAINAGNDIIHGLIGPGIDASHA-YERTHRDSLYHTEKLVYAYLFSNILK |
| 3GB0 Chain:A ((3-372)) | ----INQERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPG------N---------GI-----KP------------------------------------------------------------------------SIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKN-IPHGTIEFIITVGEESGLVGAKALDRERITAKYGYALDSDGKVGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLGRIDSETTANIGRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEKIGRTPSLHQ-SGGGSDANVIAG--HGIPTVNLAVGYEEIHTTNEKIPVEELAKTAELVVAIIEEVA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63088 for 2061 contacts (-30.6/contact) +
2D Compatibility (PS) -27415 + (NN) -15581 + (LL) 7600
1D Compatibility (HY) -4800 + (ID) 2800
Total energy: -106084.0 ( -51.47 by residue)
QMean score : 0.425
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