Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILILDDEMFARQELSFLVEHSQEVDNPEIFQAEDISEAEKILFRQQIDLIFLDISLSEENGFTLANQLSQLAHPPLVVFATAYDNY--AVKAFESNAVDYIMKPFEQQRVDMALSKVKKLSQLTTASDVEQAIPKKASVELLTLTLSDRSVVVKMQDIVAASVEDGELTVSTVQKTYTIRKTLNWFKSRAVAPYFLQIHRNTVINLEMIEEIQPWFNHTLLLIMSNGEKFPVGRSYLKDLNEHLTM
3W9S Chain:A ((2-117))
-KILVIEDDALLLQGLILAMQSE-GY---VCDGVSTAHEAALSLASNHYSLIVLDLGLPDEDGLHFLSRMRREKMTQPVLILTARDTLEDRISGLDTGADDYLVKPFALEELNARIRALLR-------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3W9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75712 for 868 contacts (-87.2/contact) +
2D Compatibility (PS) -12526 + (NN) -10404 + (LL) 10948
1D Compatibility (HY) -9200 + (ID) 1300
Total energy: -98194.0 ( -113.13 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3W9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W9S-query.scw
PDB file :
Tito_Scwrl_3W9S.pdb
: