Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDKKIVYYFDHDLSKKDMGGVGPTYTGKNLLFLLWWTYSYVAEDNLDIDTSLFEVPEFNDFYNNGLELYRIKNELANYNIRFGYEVNPKDSTKMLIGILPTDEEDYVKGYRNFIADISNPDTRYAIYHRLIKTMDTMLPIEQINVYKSLAKGNKK
4O8W Chain:A ((14-123))
AVKETLQQMLTSDQGKKFWESALKD-------------------------------PKFAESFAKGLQAEHEKMMRALMK--------DPDYQALMIDILKDPEME-----KAMVDVLKSKEFRQHLQKVITETLNS--PLYQAKIQDMLMKAAEK
General information:
TITO was launched using:
RESULT:
Template:
4O8W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9250 for 484 contacts (19.1/contact) +
2D Compatibility (PS) -11581 + (NN) -1972 + (LL) 3676
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -4477.0 ( -9.25 by residue)
QMean score : -0.059
(partial model without unconserved sides chains):
PDB file :
Tito_4O8W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O8W-query.scw
PDB file :
Tito_Scwrl_4O8W.pdb
: