Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MIKTKFSDPLEQLAKKRKRKTLFKTVVLA--------LITVLLVVGIAFKGFTYLTSKNGQKTYHNFELLSEIAYPNISYDSLYYQPSGQFTGKVHADRFKDIDGVQIPYSSFEENYSISGTFGTNADEKSEKNGLYDRGTRQKVPQFFNKNVKYKKGEAKTTPTNDLKYVNKLNNDLIEIAITFDKSYSYKEIKTMIPNNIKQNWLWIGTSTELDTSYWPTKYQFGTDPETLNTPQIFIDKIKENLKGNSKVYFNNINIYSDLEKYAKKYDKVNNSDKLKFSGIILTGKAENFKQLKEKEWVHASSIGANIEYKPYYKLDKE |
| 1T71 Chain:A ((1-281)) | MMNSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVNYITM--GNHTWFQKLDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELI------------------------------------LKRDCDLHIVDFHAETTSEKNAFCMAFDGYVT---TIFGTHTHVPSA----------DLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSREHFEVSKCGAQLNGVFFEVDVNT-KKVIKTEAIRIVEDDPRYLKQDYFNLI-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23598 for 2076 contacts (11.4/contact) +
2D Compatibility (PS) -27473 + (NN) -5253 + (LL) 2724
1D Compatibility (HY) -4000 + (ID) 1600
Total energy: -12004.0 ( -5.78 by residue)
QMean score : 0.217
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