Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEKYVNKVIVILGASFAGMTCAQKLRQLNPNWDIVLIDKEIHPDYVPNGLNWYYRHEISGLNQAMWQTEEEQRLQNIRCLFGLKVEKINKEDRELMLSD-----GSSVYYDQLICAMGSQAESTYIDGADAQGVLTTKTYATSQNAKQVLD--KSHKVAVVGAGIIGLDIAYSLHE-SGKAVTLLEAQERPDFRHTDPDMSLPLLDAMAESKLHFFQNQKVEKITVTREEKLC-LRTLTGDTFTVDAVILAVNFRPDSRLLTG-LVDLSVDNSVVVNDYFQTSDPNIYAIGDLIWSYFKGLNSAYYMPLINQAIRSAQMLAYHLSGHAVPKLKITRATGSKHFGYYRANIGLTELEAGLYEDTVSVTYFPKEQYDLRIKLIANQKTGHLLGAQLI---SKENCLATANQLVQAISCDMTDFDLAFQDFIYTARESEMAYMLHQAAINLYEKRIGLCE |
| 3IWA Chain:A ((4-462)) | -------KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQA------------------------------------VEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENG-KVARVITD-KRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQ---IMTLQLVVDRPTRRVLGIQGFSTLGDAL-TARINAVATMLASKPTVEDISNAEVV--------MDIVNVAGNVADNVLA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241430 for 3393 contacts (-71.2/contact) +
2D Compatibility (PS) -41701 + (NN) -10883 + (LL) 4356
1D Compatibility (HY) -8400 + (ID) 4100
Total energy: -302158.0 ( -89.05 by residue)
QMean score : 0.504
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