Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKDDSLTL-HTDLYQINMMQVYFNKGIHNKRAVFEAYFRKVPFENGY--AVFAGLERIV-RYLENLSFSDSDLSYLEELGYPE--------EFLDYLKNLK---MELTVKSAKEGDLVFANEPLVQIEGPLAQCQLVET---AILNIINYQTLVATKAARIRSVIED-------------EPLLEFGTRRAQEMDAAIWGTRAAIIGGANATSNVRAGKIFNI--------PVSGTHA--HALVQTY--GDDYQAFKAYAETHKD--CVFLVDTYDT---LRVGVPNAIRVAKEMGEKINFLGVRLDSGDL-AYLSKKVRQQLDDAG-----------FPNAKIYASNDLDENTILNLKMQ-K-----AKIDVWGVGTKLITAYDQPALGAVYKIVSIETDAGSMRDTIKLSNNAEKVSTPGKKQ-VWRITSRAKGKSEGDYITFADTDVTQLDEIEMFHPTYTYINKTVRDFDAVPLLVDIFDKGKLVYQLPSLQEIQEYGRKEFDQLWDEYKRVLNPQDYPVDLARDVWQNKMDLIDRIRKEALAKGEVR |
| 2H3B Chain:A ((11-486)) | ----EFNILMATDSYKVTHYKQYP-------PNTSKVYSYFECREKKYEETVFYGLQYILNKYLKGKVVTKEKIQEAKEVYREHFQDDVFNERGWNYILEKYDGHLPIEVKAVPEGSVIPRGNVLFTVENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLMETSGNLDGLEYKLHDFGYRGVSSQETAGIG-ASAHLVNFKGTDTVAGIALIKKYYGTKDPVPGYSVPAAEHSTITAWGKDHEKDAFEHIVTQFSSVPVSVVSDSYDIYNACEKIWGEDLRHLIVSRSTEAPLIIRPDSGNPMDTVLKVLDILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKKWSIENVSFGSGGALLQKLTRDLLNCSFKCSYVVTNGLGVNVFKDPVADPNKRSKKGRLSMHRT--------PAGNFVTLEE-------------------GKGDLEEYGHDLLHTVFKNGKVTKS-YSFDEVRKNAQLN----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124808 for 3200 contacts (-39.0/contact) +
2D Compatibility (PS) -42215 + (NN) -7588 + (LL) 6184
1D Compatibility (HY) -8800 + (ID) 3900
Total energy: -181127.0 ( -56.60 by residue)
QMean score : 0.363
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