Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKKNNYDLMYFIPLVFLIYPIGGILYYHYPFWTLFFTLAFVGAYLYSVIIRGESKYHMIAWSTMLTYIFYMTIFINSGFIWYIYFLSNLLVYRFRDKLKSFRFISFACTLATVVFLCFFKASDFGDRIMFLIVPIFCIGYMWIAIENRNSEEQREKIAEQNQYINILSAENERNRIGRDLHDSLGHTFAMMTLKTELALKLLEKRNYDKVQKELSELNHISHQSMSEVRQIVSNLKYRTVVEEIDELYRLFQLSNIKLTVVNKLETSQLSPVTQSTITMILKELSNNIVKHAE-------------ADSVELSLVRQGATINIEMIDNGCGFTN------------------------------------LDGDEFHSIQERLTIVEGTLTILSRSK-PTHIQVVLKEV |
1B3Q Chain:A ((80-247)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFS--GVGMDVVKNVVESLNGSMGIESEKDKGTKVTIRLPLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38728 for 741 contacts (-52.3/contact) +
2D Compatibility (PS) -11233 + (NN) 182 + (LL) 22668
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -31861.0 ( -43.00 by residue)
QMean score : 0.560
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