Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFSKKDKYIRISPNKALGSSDKRSLPEVPDELFAKCPSCKHMIYQKDLGLAKICPACSYNFRISAQERLLLTVDEDSFEELFTGIETKDPLNFPNYREKLAATRQKTNLDEAVVTGLAKIKGQTTALAIMDSHFIMASMGTVVGEKLTRLFELATEKKLPIVIFTASGGARMQEGIMSLMQMAKVS-AAVKRHSNQGLFYLTILTDPTTGGVTASFAM---EGDIILAEPQALVGFAGRRVIETTVREDL--------------PE----GFQKAEFLLEHGFVDAIINRTELRDCIAQLIAFHGNEVGHE |
| 1ON3 Chain:A ((281-509)) | ------------------------------------------------------IVPI-DGKKGYDVRDVIAKIVDWGDYLEVKAG------------------------YATNLVTAFARVNGRSVGIVANQPSVMSGCLDINASDKAAEFVNFCDSFNIPLVQLVDVPGFLPGVQQE-YGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQNAFNTPYVAAARGQVDDVIDPADTRRKIASALEMYATKRQTR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ON3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142108 for 1728 contacts (-82.2/contact) +
2D Compatibility (PS) -22736 + (NN) -11573 + (LL) 4480
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: -178337.0 ( -103.20 by residue)
QMean score : 0.408
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