Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MKIGRLIALGLV------SLGALELYK--NRKTIKDSYQNTKIETDSAKLKLERIKNDLAIISQEK-------EKIRLISQELNHKFQVF--NKDIQPRLEEINQRMAKYQEKDE-
3T7Z Chain:A ((1-119))
MIYVTFTPYGAFGVKDNKEVSGLEDIEYKKLFNEEEIPDIMFKLKTQPNKIADELKEEWGDEIKLETLSTEPFNIGEFLRNNLFKVGKELGYFNNYDEFRKKMHYWSTELTKKVIKSYA
General information:
TITO was launched using:
RESULT:
Template:
3T7Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3638 for 614 contacts (-5.9/contact) +
2D Compatibility (PS) -10363 + (NN) -417 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -19218.0 ( -31.30 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_3T7Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T7Z-query.scw
PDB file :
Tito_Scwrl_3T7Z.pdb
: