Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MIANQTIVDIVTQVV-TPAIQAPFELVDVEYEKMGGDYVLSILIDKPGGITVEDTAQLTDVVSPLLDTIQPD-PFPEQYMLEVS--SPGLERPLK-----------TAEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGETLTIDYMDKTRHKTVDIPYQTVAKARLAVKL
4QGL Chain:A ((1-174))
GAAAMAQIRIHEVNTRIENEVKVSKFLQEEGVLYEKWNISK-LPPHLNENYSLTDENKAEILAVFSKEIADVSARRGYKAHDVISLSNSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQ-VVAIRIFVTTEGWVPIY-
General information:
TITO was launched using:
RESULT:
Template:
4QGL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29081 for 1058 contacts (-27.5/contact) +
2D Compatibility (PS) -16238 + (NN) 5800 + (LL) 432
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -47187.0 ( -44.60 by residue)
QMean score : 0.215
(partial model without unconserved sides chains):
PDB file :
Tito_4QGL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QGL-query.scw
PDB file :
Tito_Scwrl_4QGL.pdb
: