Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKISQYNKWSIRRLKVGAASVMIASGSIVALGQSHIVSADEMSQPKTTITAPTANTSTNVESSTDKALSKVTTMETSSEMPKMQNMAKVEKTSDKPMMVATSVRKMMATPTPVAMTKTTSVDEVKKSTDTAFKQTVDVPAHYVNAAKGNGPFLAGVNQTIPYEAFGGDGMLTRLILKSSEGAKWSDNGVDKNSPLLPLKGLTKGKYFYQVSLNGNTTGKEGQALLDQIKANDKHSYQATIRVYGAKDGKVDLKNMISQKMVTINIPHITTDMEVKNSLKMAFKEKVDVPAKYVSA--AKA-KGPFLAGVNE---TIPYEAFGGDGMLTRLILKASEG--------AKWSDNGVDKNSPLLPLKDLTKGKYFY---QVSLNGNTAG-KKGQALLDQIKANGSHTYQATITIYGTKDGKVDMNTILGQKTVMIHINVAKK--DMNSTSMMMKKDKMTMPMKKEMTSSKINTGMMMSNNKMSANMQMSSQAKSNDKAGKKMSMMSKNLPNTGETKQQNVGVLGMLSLAFATGLTALGLKKSKQR |
| 4QRK Chain:A ((9-220)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPKEEIKIVEPNGAEKTKLNLNFGVGKLNISGNEEKLMKGKFIYSENEWKPEIKYEVKDKDGELEISQPGLKSGNVSLNNKRNEWNINLNEKIPTEIKLS-LGTGEFKADLSKINLKELNVGMGVGKVDLD---ISGNYKNNVKVNIEGGVG----EATVYLPKSIGVKIKAEKGVGAVNANGFIVEGENIYKNSQYGKSKNSIEVNIEAGVGAINIKQK---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4106 for 1507 contacts (2.7/contact) +
2D Compatibility (PS) -19324 + (NN) 11850 + (LL) 19352
1D Compatibility (HY) -2000 + (ID) 1850
Total energy: 12134.0 ( 8.05 by residue)
QMean score : 0.071
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