Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------MEKKLLRKEVLITLKSQPQAYKSEVDCKLLEAFIKTKAYQNSCVIATYLSFDYEYNTQLLIKQALCDGKRVLVPKTYPKGKMIFVDYQKDNLRATPFGLLEPV-----NDRAVEKASIDLIH---VPGLIFNNKGFRIGYGAGYFDRYLSDFEGDTISTIYRCQRQDFVEEKHDVAVKEVLCL----------------------------------- |
| 4E8Y Chain:A ((43-350)) | VVPVPREQLARSRVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGAANVARNAVTLGGQAGLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAM-PTHEVLLAGLARFDVLLPQHDVVLMSDYAKGGLT-HVTTMIEKARAAGKAVLVD---PKGD-DWARYRGASLITPNRAELREVVGQWKSEDDLRARVANLRAELDIDALLLT----RSEEGMTLFS------AGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVPLVDAVVLANRAAGIVVGKLGTATVDYDEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45304 for 1013 contacts (-44.7/contact) +
2D Compatibility (PS) -16957 + (NN) -5072 + (LL) 992
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -71491.0 ( -70.57 by residue)
QMean score : 0.384
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