Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MTKEKMMSFMTIA-------SIALLGSGVVCANDVADPVAGTTDVVVVPVSPQPTTPSEHTGTDTTNKIVDSTKP------SEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSK--EKTEEPVKSNDSEVIPEQPKSEEVKKAEENTGASTTETPKPVTKPVI----------ETPIVTNTGYTVLGTQD----GNVWVQTETGNVLKPAIAIGAVKQKDGTVALKTK------------------DGKLEVLPSTGETKTILAILG--GLAILGAIWVGWKENIKKYLTFLKKKSKK |
| 1EFV Chain:A ((2-313)) | QSTLVIAEHANDSLA-PITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQ-HDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTSPVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEILK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 57675 for 1816 contacts (31.8/contact) +
2D Compatibility (PS) -26459 + (NN) -6994 + (LL) 320
1D Compatibility (HY) -2800 + (ID) 1800
Total energy: 19942.0 ( 10.98 by residue)
QMean score : 0.145
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