Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------MFFPNIDNIIKNYIKEMITH-----SDIPDLQKQLETAYQV-P----YSFALGIYISTIESIILNWIDHDFTEEPEEIARYITSVVRI--------------------------------
3ZTA Chain:A ((8-146))
KAENIVEKAINLLSKEDQAGVHFNEISALTRDFCRAILSDLEQSGFTTSELEKEIADKVKIMFAQGYHIEVLQLILEKILDSFISVIREQY-HDLQAAASYITTVRDHIFKGTSFLLKMALQTQREVIQKQNEALMELST
General information:
TITO was launched using:
RESULT:
Template:
3ZTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25009 for 445 contacts (-56.2/contact) +
2D Compatibility (PS) -7866 + (NN) 1095 + (LL) 52
1D Compatibility (HY) -4000 + (ID) 450
Total energy: -36178.0 ( -81.30 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_3ZTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZTA-query.scw
PDB file :
Tito_Scwrl_3ZTA.pdb
: