Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELGITTFGETTILEETNQSYSHPERIRQLVAEIELADQVGLDVYGIGEHH----REDFAVSAPEIVLAAGAVRTNNIRLSSAVTILSSN-DPIRVYQQFSTIDALSNGRAEIMAGRGSFIESFPLFG--YDLADYDDLFNEKMDMLLAINSATNLDWKGHLTQTVNERPIYPRALQRQLPIWVATGGNVDSTIRIAEQGLPIVYATIGGNPKAFRQLVHIYKEVGSRNGHKPEQLKVAAHSWGWIEEDNQTAIDRYFFPTKQTVDNIAKGRPHWSEMTKEQ---YLRSVGPEGAIFVGSPEVVAHKIIGLVEALELDRFMLHLPVGSMPHKDVLNAIKLYGKEVAPIVRKYFEKN |
| 1RHC Chain:A ((1-330)) | -MKTQIGYF-----------ASLEQYRPMDALEQAIRAEKVGFDSVWVDDHFHPWYHDNAQSAQAWAWMGAALQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAMNEVPVTGEWPSVPVRQDMTVEAVKVMRMLWESDKPVTFKGDYFTLDKAFLYTKP-DDEVPLYFS--GMGPKGAKLAGMYGDHLMTVAAAPSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAVEALRFWAGCLVPSMFKYKVYDPKEVQLHANLVHCDTIKENYMCATDAEEMIKEIERFKEA-GINHFCLGNS-----SPDVNFGIDI-FKEVIPAVRD----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109530 for 2764 contacts (-39.6/contact) +
2D Compatibility (PS) -33734 + (NN) -8000 + (LL) 1620
1D Compatibility (HY) -6400 + (ID) 2800
Total energy: -158844.0 ( -57.47 by residue)
QMean score : 0.409
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