Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTGIIEEMGQVSRIRNG-IKSQQLSIDAPKLVPLLRKGDSVAVNGVCLTVLDKSETAFIADVMPESMMRTSLAALRLHSKVNLELALRSDSRLGGHFVLGHVDGVGKIEKIQKDDIAVRFSIDAP-PSIMSYIIEKGSVALDGISLTVVSFTEHSFEVSVIPHTMAQTNLSLKKVGDLLNIEVDVLGKYAEKFLAPTNRTNHTSSVMDWSFLSENGY
1KZL Chain:A ((1-202))
MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVDDSTFSIMMISYTQSKVIMAKKNVGDLVNVEVDQIGKYTEKLVEAHIADW----------------
General information:
TITO was launched using:
RESULT:
Template:
1KZL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101260 for 1561 contacts (-64.9/contact) +
2D Compatibility (PS) -20943 + (NN) 1562 + (LL) 716
1D Compatibility (HY) -16400 + (ID) 3900
Total energy: -140225.0 ( -89.83 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_1KZL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KZL-query.scw
PDB file :
Tito_Scwrl_1KZL.pdb
: