Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITSIVFDVDDTIYDQQAPYRIAVEKCFPDFDMSAINQAYIRFRHYSDIGFPRVMAGEWTTEYFRFWRCKETLLEFGYRE-IDEATGIYFQEIYEH-ELENITMLDEMRMTLDFLKSKNVPMGIITNGPTEHQLKKVKKLGLYDYVDPKRVIVSQATGFQKPEKEIFNLAAEQFDMNPSTTLYVGDSYDNDIMGAFNGGWHSMWFNHRGRSLKPGIKPVYDVAIDNFEQLFGAVKVLFDLPDNKFIFDINDKSNPVLEMGLNNGLMMAAERLLESNMSVDKVVILLRLTAKQEKVLRMKYAR |
3MC1 Chain:A ((3-217)) | LYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVED--LSSLNKFV--GPPL-------KTSFM-----E---YYNFDEETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD--AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDRE-YDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILEL----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103266 for 1882 contacts (-54.9/contact) +
2D Compatibility (PS) -23167 + (NN) -8918 + (LL) 7076
1D Compatibility (HY) -14000 + (ID) 1850
Total energy: -144125.0 ( -76.58 by residue)
QMean score : 0.421
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