Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSITKEFDTIAAISTPLGEGAIGIVRISGTDALKIASKIYRGKDLSAIQSHTLNYGHIVDPDKNEILDEVMLGVMLAPKTFTREDVIEINTHGGIAVTNEILQLILRHGARMAEPGEFTKRAF-LNGRVD-LTQAEAVMDLIRA-----KTDKAMDIAVKQLDGSLKTLINN--TRQEILNTLAQVEVNIDYPEYDDVEEMTTTLMRE-KTQEFQALMENLLRTARRGKILREGLSTAIIGRPNVGKSSLLNNLLREEKAIVTDIEGTTRDVIEEYVNIKGVPLKLVDTAGIRDTDDIVEKIGVERSKKALEEADLVLLVLNSSEPLTLQDRS-LLE-LSKESNRIVLLNKTDLPQKIE--VNELPENVIP-ISVLENENIDKI----EERIND-IFFDN-AGMVEHDATYLSNARHISLIEKAVDSLKAVNEGLELGMPVDLLQVDMTRTWEILGEITGDAAPDELITQLFSQFCLGK----------------- |
| 1MKY Chain:A ((2-439)) | -------ATVLIVGRP-------------------------------------------NVGKSTLFNKLV-----------KDPVQDTVEWYG-------KTFKLVDTCGVFDNPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAENLREFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKLEEKGLDLESKPE-ITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPVD------DEVFIDGRKYVFVDTAGLEKYSN-------YRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMID--AMNLAYASYTTKVPSSAINSALQKVLAFTNLPRG-----LKIFFGVQVDIKPPTFLFFVNSIEKVKNPQKIFLRKLIRDYVFPFEGSPIFLKFKRSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81721 for 2756 contacts (-29.7/contact) +
2D Compatibility (PS) -39908 + (NN) -14495 + (LL) 6884
1D Compatibility (HY) -16800 + (ID) 3250
Total energy: -149290.0 ( -54.17 by residue)
QMean score : 0.312
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