Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSITKEFDTIAAISTPLGEGAIGIVRISGTDALKIASKIYRGKDLSAIQSHTLNYGHIVDPDKNEILDEVMLGVMLAPKTFTREDVIEINTHGGIAVTNEILQLILRHGARMAEPGEFTKRAF-LNGRVD-LTQAEAVMDLIRA-----KTDKAMDIAVKQLDGSLKTLINN--TRQEILNTLAQVEVNIDYPEYDDVEEMTTTLMRE-KTQEFQALMENLLRTARRGKILREGLSTAIIGRPNVGKSSLLNNLLREEKAIVTDIEGTTRDVIEEYVNIKGVPLKLVDTAGIRDTDDIVEKIGVERSKKALEEADLVLLVLNSSEPLTLQDRS-LLE-LSKESNRIVLLNKTDLPQKIE--VNELPENVIP-ISVLENENIDKI----EERIND-IFFDN-AGMVEHDATYLSNARHISLIEKAVDSLKAVNEGLELGMPVDLLQVDMTRTWEILGEITGDAAPDELITQLFSQFCLGK-----------------
1MKY Chain:A ((2-439))-------ATVLIVGRP-------------------------------------------NVGKSTLFNKLV-----------KDPVQDTVEWYG-------KTFKLVDTCGVFDNPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAENLREFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKLEEKGLDLESKPE-ITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPVD------DEVFIDGRKYVFVDTAGLEKYSN-------YRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMID--AMNLAYASYTTKVPSSAINSALQKVLAFTNLPRG-----LKIFFGVQVDIKPPTFLFFVNSIEKVKNPQKIFLRKLIRDYVFPFEGSPIFLKFKRSR


General information:
TITO was launched using:
RESULT:

Template: 1MKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81721 for 2756 contacts (-29.7/contact) +
2D Compatibility (PS) -39908 + (NN) -14495 + (LL) 6884
1D Compatibility (HY) -16800 + (ID) 3250
Total energy: -149290.0 ( -54.17 by residue)
QMean score : 0.312

(partial model without unconserved sides chains):
PDB file : Tito_1MKY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MKY-query.scw
PDB file : Tito_Scwrl_1MKY.pdb: