Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIKKLLGLTTTVVISALILGACGQSKNEDAKVVRVGTMVKSKTEKARWDKIEELVKKKGVKLKFTEFTDYTQPNKALESDEIDINAFQHYNYLNNWNKANKTNLVSVAETYFTSFRLYSGTKNGKGKYQTVSEIPNKATITIPNDAVNESRSLYLLQSAGLLKLKVSGDTLATMSDVVSNPKSLDLKEVDAAQT-ARSLDSTDAAVINNDFVTEAGINPKSAIFIEPKSKNAKQWYNLLVAQKGWQDKSKAKAIKEVVKAYHTDAVKKVIEKTSQGLD-QPVW |
1XS5 Chain:A ((2-240)) | ------------------------------DETVGVGVLSEP--HARLLEIAKEEVKKQHIELRIVEFTNYVALNEAVMRGDILMNFFQHVPHMQQFNQEHNGDLVSVGNVHVEPLALYSR------TYRHVSDFPAGAVIAIPNDSSNEARALRLLEAAGFIRMRAGSGLFATVEDVQQNVRNVVLQEVESALLPRVF-DQVDGAVINGNYAIMAGLSARRDGLAVEP--DASAYANVLVVKRGNE--A-DARVQAVLRALCGGRVRTYLKERYKGGEVAPA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XS5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61510 for 1988 contacts (-30.9/contact) +
2D Compatibility (PS) -24997 + (NN) -6343 + (LL) 2628
1D Compatibility (HY) -16000 + (ID) 3600
Total energy: -109822.0 ( -55.24 by residue)
QMean score : 0.477
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