Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTHINITLDMG--ETSKDLRIPLKISVKQLVMELDSIFSRTERRTKYQLRVINK--G---ILLGENDILAHHPVTTGDRIRIEEFY
1V6E Chain:A ((8-85))
----VMVFISSSLNSFRSEKRYSRSLTIAEFKCKLELVVGSP--ASCMELELYGADDKFYSKLDQEDALLGSYPVDDGCRIHVIDHS
General information:
TITO was launched using:
RESULT:
Template:
1V6E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53531 for 483 contacts (-110.8/contact) +
2D Compatibility (PS) -7294 + (NN) 1132 + (LL) 428
1D Compatibility (HY) -6000 + (ID) 550
Total energy: -65815.0 ( -136.26 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_1V6E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V6E-query.scw
PDB file :
Tito_Scwrl_1V6E.pdb
: