Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHLEIEYKTLLNKDEFNRLTSLF-----SHVQPITQTNYYFDTETFEMKAHRMSLRIRTLPNRAELTLKIP-REVGNLEHNHDLTLEEAKYIVKNGQFPED---TEIASLILEKGVDPTKLAVFGQLTTTRREMETSIGLMALDSNIYA-----DIKDYELELEVKQPKQGKRDFDQFLKENNINFKYAKSKVARFSATLKNN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 5A61 Chain:A ((2-430)) | AMAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLFSTDFYREKWLVAVDDSRIEIALDQGEVKAGEFAEPICELELELLSGDTRAVLKLANQLVSQTGLRQG-SLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAAFELALAQWQYHEELWVRGNDAAKEQVLAAIGLVRHALMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSKAWQPFLDAKAQGKISDSFKRFADIHLSRHAAELKSVFCQPLGDRYHDQLPRLTRDIDSILLLAGYYDPVVAQAWLENWQGLRHAIATGQRIEIEHFRNEANNQEPFWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A61.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2545 for 1385 contacts (1.8/contact) +
2D Compatibility (PS) -19327 + (NN) 4963 + (LL) 92
1D Compatibility (HY) -4400 + (ID) 2150
Total energy: -18277.0 ( -13.20 by residue)
QMean score : 0.282
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