Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYQEALEWIHSKLAFGIKPGLERMRWMLEQLGNPQNNLSAIHVVGTNGKGSTTSYLQHIFTNSGYQVGTFTSPYIVDFRERISIDGQMIPESDFIKLVETVRPVVERLHLETNLEPATEFEVITVLMFYYFGNSCPVDIVIIEAGMGGYYDSTNMFKALAVTCPSIGLDHQEVLGRTYVDIAEQKVGVLKK---GVPFVYANDRQDVEEVFQIKAKETHSQTYRLHNDF----YIKE------EENYFNYIGPQANIDHIQLQMPGHHQVSNASIAITTSLLLRDKYPKLTLQTIKDGLE-MTKWVGRTELIF--------PNVMIDGAHNNESVDALVQVIKK-YQQKNVHILFAAINTKP----IESMLESLSSIA-PVSVTSFDYPKSI------NLDKYPK-A-------YTRVSDWKKWLH-DINLTSDKDFYVITGSLYFISQVRQELLLIKTTTT |
| 1P3D Chain:A ((117-473)) | -------------------------------------FRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTF--------------VNGGLVKSAGK---------------------------------NA-HL-G-ASRYLIAEADESDA--SFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPK----VGRQVITYGFSEQADYRIEDYEQTGFQGHYT-VICPNNERINVLLNVPGKHNALNATAALAVAKEE-----GIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRDLFDDFVQVLSQ-VDALIMLDV-YAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLILAQGAGSVSKISRGLAESW----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165208 for 2700 contacts (-61.2/contact) +
2D Compatibility (PS) -33176 + (NN) -5895 + (LL) 8516
1D Compatibility (HY) -6800 + (ID) 2600
Total energy: -205163.0 ( -75.99 by residue)
QMean score : 0.423
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