Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKGLIATLILLTILVVGELFYNKSEKHLNLSEKQVVKIGILQYV---PHDALDAIEKGVEDGLAQEGYKGKKVKLTVLNAEADQSKIQAMSKQLVNHHNDILIGIATP--S----AQGLAASTKDTPIIMGAVSDPLGAKLVTNMKKPTTNVTGLSNVVPTKQTVQLIKDITPNVKRIGILYASS-EDNSVSQVTEFTKYAQKAGLEVLKYSV--PSTNEIKTSMSVM---TKKVDAVFVPQDNTIASAFRTVIVAANQANIPVYSSVDTMV-EQG-SIASVAQSQYGLGLETAKQAIKVLRGKPVKDVPVKVIDTGKPSLNLKAAKHLGIKIPKKIMKQAEITVKVDD |
| 3BRS Chain:A ((5-266)) | ------------------------------------QYYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEIK---LEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAADYEKTYDAAKEIKD--AGIKLIVIDSGMKQD---------IADITVATDNIQAGIRIGAVTKNLVRKSGKIGVISFVKNSKTAMDREEGLKIGLSDDSNKIEAIYYCDSNYDKAYDGTVELLTKYPDISVMVGLNQYSATGAARAIKDMSLEAKVKLVCIDSSMEQ-EGIFEAMVVQKPFNIGYLGVEKALKLLKKEYVPKQLDSGCALITKD----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BRS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61021 for 2084 contacts (-29.3/contact) +
2D Compatibility (PS) -25950 + (NN) -10152 + (LL) 5732
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -98341.0 ( -47.19 by residue)
QMean score : 0.445
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