Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFGIGKAHSKIILMGEHSVVYGYPAIAIPLKNIEVTCLIEEAPQ-LIAL-DMT-------------DP----LSTAIFAALDYLGKTSSKIAYHIESQVPERRGMGSSAAVAIAAIRAVFDYFDEDLEADLLECLVNRAEMIAHSNPSGL-DAKTCLSE---NTIKFIRNI-GFSTVPMHLNAYLVIADTGIHGHTKE-AVDKVKSS-------G----------------E-AVLPFLK---ELGYLAEASEDAIHKSDSKQLGSLMTKAHQSLKQ-LGVSSLEADHLVEVAISCGALGAKMSGGGLGGCIIALVKEKREAERLSQQLEREGAVNTWTEKV |
| 2CZ9 Chain:A ((2-327)) | -----IKVKSPGRVNLIGEHTDYTYGYVMPMAINLYT-KIEAEKHGEVILYSEHFGEERKFSLNDLRKENSWIDYVKGIFWVLKES-DYEVGGIKGRVSGNLPLGAGLSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFGREGNVIFLDTHTLDYEYIPFPKDVSILVFYTGVR----SSEYAERKHIAEESLKILGKGSSKEVREGELSKLPPLHRKFFGYIVRENARVLEVRDALKEGNVEEVGKILTTAHWDLAKNYEVSCKELDFFVERALKLGAYGARLTGAGFGGSAIALVDKE-DAETIGEEILREYLKRFPWKAR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -137499 for 2233 contacts (-61.6/contact) +
2D Compatibility (PS) -29375 + (NN) -11944 + (LL) 1028
1D Compatibility (HY) -12400 + (ID) 2750
Total energy: -192940.0 ( -86.40 by residue)
QMean score : 0.516
|
|
|