Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIRKLVVMSDSHGDRDIVK-------------DIKNHYL----GKVDAIFHNGDSELPSSD-----PIW----EGIHVVTGNCDYDSGY-P----EV----LVTKIDNTVIVQTHGHLHQINF-----TWDKLDLLAQQEDADICLYGHLHRADAWKN-----GKTIFINPGSVLQPRGPINEKLYAVVTITDSKVLVEYYTRQHQPYPNLTKEFSR
1XM7 Chain:A ((-1-172))
---AMMYFISDTHFYHENIINLNPEVRFKGFEIVILT-NLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALPGRKILVMGNHDKDKESLKEYFDEIYDFYKIIEHKGKRILLSHYPAKDPITERYPDRQEMVREIYFKENCDLLIHGHVHWNREG--CACKDYRIECINANVEWNDYKPISEREIDKLI---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51198 for 837 contacts (-61.2/contact) +
2D Compatibility (PS) -14372 + (NN) -13471 + (LL) 2588
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -81003.0 ( -96.78 by residue)
QMean score : 0.276
(partial model without unconserved sides chains):
PDB file :
Tito_1XM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XM7-query.scw
PDB file :
Tito_Scwrl_1XM7.pdb
: