Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRMIPGRIRNQGIELYEQGLVSLISQEGNLLKAKVGDCQIEYSLVTEETKCSCDFFARKGYCQHLAALEHFLKNDPEGKAILSKVQVQQESQQETKKKTSFGSVFLDSLIINEDDTIKYQLSAQGEQNPYANDIWWTLKIRRLPDDRSYVIRDIKAFLNTVRKEAYYQIGKQYFETLSLIQFDETSQELIEFLWRLIPSHSSKIDLEFILPNQGRHLSLTRGFFEEGVTLMNALENFSFESDFHQFNHLYFKELEGEDHLYQFKVIVHRQSIELEIKEKDLKPLFANSYLFYRDTFYHLNLKQEKMVTAIRSLPIEGDLAKHIHFDLDDQDKLAAHLLDFKEIGLVDAPRSFSIHDFKVNFEFDINSQNEILLQMVFDYGNDLTVHNRQELEQLTFASHFKHEEKIFKLLERYGFAPHFSTSHPAYSAQELYDFYTYMLPQFKKMGTVSLSAKLESYRLIERPQIDIEAKGSLLDISFDFSDLLENDVDQALVALFDNNPYFVNKSGQLVIFDEETKKVSATLQGLRARRAKNGHIELDNIAAFQLSELFANQDNVSFSQHFYQLIEDLRHPEKFKIPGLSVSASLRDYQLTGVRWLSMLDHYGFAGILADDMGLGKTLQTISFLSTKLT-RDSRVLILSPS-SLIYNWQDEFHKFAP--DVDVAVAYGSKIRRDEI-IAERHQVIITSYSSFRQDFE--TYSEGNYDYLILDEAQVMKNAQTKIAHS---LRSFEVKNCFALSGTPIENKLLEIWSIFQIILPGLLPGKKEFLK---------------LNPK----Q--------VARYIKPFVMRRRKEEVLPELPDLIEMN----YPNEMTDSQKV-----IYLAQLR---------------QIQESIQH---SSDADLNRRKIEILSGITRLRQICDTPRLFMDYDGESGKLESLHQLLTQIK--ENGHRALIFSQFRGMLDIAEREMVAMGLTTYKITG----STPANERHEMTRAFNAGSKDAFLISLKAGGVGLNLTGADTVVLIDLWWNPAVEMQAISRAHRLGQKENVEVYRLITRGTIEEKILEMQETKKHLVTTVLDGNETHASMSVDDIREILGVSK |
| 1WP9 Chain:A ((8-486)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IQPRIYQEVIYAKC-----KETNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTGEKSPEERSKAWARAKVIVATPQTIENDLLAGRISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAKNPLVIGLTASPG-STPEKIMEVINNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDLPEIYKEVRKLLREMLRDALKPLAETGLLESSSPDIPKKEVLRAGQIINEEMAKGNHDLRGLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKAGSTKASKEIFS-DKRMKKAISLLVQAKEIGLDHPKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASK---QREQKLILDEFARGEFN-VLVATSVGEEGLDVPEVDLVVFYEPVPSAIRSIQRRGRTGRHM---PGRVIILMAKGTRDEAYYWSSR-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173833 for 2967 contacts (-58.6/contact) +
2D Compatibility (PS) -43421 + (NN) -12808 + (LL) 45940
1D Compatibility (HY) -11200 + (ID) 3650
Total energy: -198972.0 ( -67.06 by residue)
QMean score : 0.433
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