Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNVKDITRESWILSTFPEWGTWLNEEIE-E-EVVADGNFAMWWLGNCGVWIKTPGGANVVMDLWSNRGKSTKKVKDMVRGHQMANMAGVRKLQPNLRAQPMVIDPFAINELDYYLVSHFHSDH------IDINTAAAIINNPNLDHVKFVGPYECGEIWKKWGVP-EERIIVIKPGESFEFKDIKVTAVESFDRTCLVTLPVDGAEEHDGELAG-LAVTDEEMARKAVNYIFETPGGTIYHGADSHFSNYFAKHGKDYKIDVAINN-YGDNPVGIQDKM-TSIDLLRMAENLRAKVIIPVHYDIWSNFMASTDEILQLWKMRKERLQYDFHPFIWEVGGKYTYPQDKDRIEYHHPRGFDDCFEQESNIQFKALL |
| 1ZKP Chain:A ((18-268)) | LYF----------------------QSNAMKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSG-------------------------------VLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSISFLKT---------------VHPVTCFAMRITAG---------------NDIVVYSADSSYIPEFIPFTKDADLFICECNMYAHQEA-AKAGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFS------------------GHITLAHSGYVWNS---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92646 for 2019 contacts (-45.9/contact) +
2D Compatibility (PS) -25700 + (NN) -7161 + (LL) 8516
1D Compatibility (HY) -3200 + (ID) 1700
Total energy: -121891.0 ( -60.37 by residue)
QMean score : 0.467
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