Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSFEELLATMTLITAAEIEDK-IDSNQDFVLFIGRISCPFCHLFVPKIVEVADED--EFELFHLDSEDFDHWTANKEFRNKYDIPTVPGLMVVKNG-TI-KVKCDSKMTKEEIREFIG
1FB6 Chain:A ((10-108))
-----------QDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP------GIATQYNIRSIPTVLFFKNGERKESII-GAVPK-STLTDSIE
General information:
TITO was launched using:
RESULT:
Template:
1FB6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61743 for 660 contacts (-93.5/contact) +
2D Compatibility (PS) -9832 + (NN) -2216 + (LL) 1868
1D Compatibility (HY) -7200 + (ID) 850
Total energy: -79973.0 ( -121.17 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_1FB6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FB6-query.scw
PDB file :
Tito_Scwrl_1FB6.pdb
: