Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MAKCLTLNTHSWMEVNALKKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLKPLKPEDILVSAVDDETDYHTRRALVAETTLNDKVVTVVSLHLSWFEKGFAEEWKRLETTLLEVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSEDLSISSSQVVFEGGEAPVVSDHYGLEITMDF-- |
| 1WDU Chain:A ((18-245)) | PPYRVLQANLQ-----RKKLATAELAIEAATRKAAIALIQEPYVKGFRG-----------------------------------VRVFQSTAQGDGTV----KAAIAV--FDHDLDVIQYPQLTTNNIVVVGIRT-----RAWEITLVSYYFEPDKPIESYLEQIKRVERKMGPKRLIFGGDANAKSTWWG----SKEDDARGDQLMGTLGELGLHILNEGDVPTFDTRYQSRVDVTFCTEDMLDLIDGWRVD--EDLVSSDHNGMVFNIRLQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WDU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65800 for 1810 contacts (-36.4/contact) +
2D Compatibility (PS) -23590 + (NN) -13912 + (LL) 3876
1D Compatibility (HY) 6800 + (ID) 1750
Total energy: -94376.0 ( -52.14 by residue)
QMean score : 0.314
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